genomicsnpanalyzer.genomebrowser.entry
Class SortableCNVLociFunction

java.lang.Object
  extended by genomicsnpanalyzer.genomebrowser.entry.SortableCNVLociFunction
All Implemented Interfaces:
java.io.Serializable, java.lang.Comparable

public class SortableCNVLociFunction
extends java.lang.Object
implements java.lang.Comparable, java.io.Serializable

See Also:
Serialized Form

Field Summary
 byte[] bases
           
 byte bytechr
           
 double consensus
           
 int end
           
 java.util.ArrayList functions
           
 int indexid
           
 boolean inDGV
           
 boolean inHapmap
           
 boolean inIllumina1M
           
 boolean inVenter
           
 boolean isRsOrEns
           
 short layer
           
 double numReads
           
 double quality
           
 double reads4indel
           
 double reads4ref
           
 boolean RMR
           
 double RMS
           
 int rsn
           
 int size
           
 int start
           
 java.util.ArrayList subjects
           
 byte type
           
 java.lang.String typeLoaded
           
 int venterIdx
           
 
Constructor Summary
SortableCNVLociFunction()
           
 
Method Summary
 int compareTo(java.lang.Object another)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

indexid

public int indexid

bytechr

public byte bytechr

start

public int start

end

public int end

type

public byte type

typeLoaded

public java.lang.String typeLoaded

numReads

public double numReads

consensus

public double consensus

RMS

public double RMS

reads4indel

public double reads4indel

reads4ref

public double reads4ref

quality

public double quality

size

public int size

bases

public byte[] bases

inDGV

public boolean inDGV

subjects

public java.util.ArrayList subjects

functions

public java.util.ArrayList functions

isRsOrEns

public boolean isRsOrEns

rsn

public int rsn

inHapmap

public boolean inHapmap

inIllumina1M

public boolean inIllumina1M

inVenter

public boolean inVenter

venterIdx

public int venterIdx

RMR

public boolean RMR

layer

public short layer
Constructor Detail

SortableCNVLociFunction

public SortableCNVLociFunction()
Method Detail

compareTo

public int compareTo(java.lang.Object another)
              throws java.lang.ClassCastException
Specified by:
compareTo in interface java.lang.Comparable
Throws:
java.lang.ClassCastException